Medical Imaging
DICOM / NIfTI viewer, annotation tools, and AI-assisted classification & segmentation.
8 min readOpen in app
Video walkthrough coming soon
/public/media/imaging-walkthrough.mp4- Viewer: multi-planar reconstruction, window/level presets (CT brain, lung, bone, etc.)
- Annotations: ROI, bounding box, polygon, mask, freehand measurements
- AI models: pre-trained classifiers and segmenters; bring your own via ONNX
- Interoperability: export annotations as DICOM-SEG, Structured Report (SR), or RT Structure Set (RTSTRUCT) for a TPS / 3D Slicer round-trip
- Radiomics: extract IBSI-aligned features (first-order, shape, GLCM, GLRLM, GLSZM) from any ROI
- Collaboration: real-time multi-user annotation with presence indicators
Train a model from your annotations
The DICOM-SEG export panel includes one-click training actions that turn your annotations into a model on the Deep Learning worker fleet — no round-trip through an external trainer.
- 1Train detector from boxesYour rectangle/box annotations become an object-detection model (Faster R-CNN).
- 2Train segmenter from regionsYour polygon/freehand/brush regions are rasterised into masks and become a segmentation model (U-Net).
- 3Train classifier from labelsEach image is labelled by its dominant annotation class and becomes an image classifier.
Clicking any of these takes you straight to Deep Learning → Training, where the run resumes live — no manual navigation. (Segmentation needs at least one region; classification needs at least two classes.) The same in-browser annotator is available there for general, non-DICOM images.
You are training a model, not painting the slice
These actions teach a model to segment/detect from your examples; they do not overlay a segmentation back onto the current slices. To see predictions, deploy the finished model (Deep Learning → Deploy) and run it on new images. The first epoch can take a few minutes on the CPU fleet — the monitor shows a “Starting up” banner until it begins.
Clinical use
Nexmetry Imaging is a research tool. It is not FDA-cleared for diagnostic use. Do not base clinical decisions on model outputs without validated pipelines.
